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Table 2 Enriched Gene ontology terms represented by the 46 PN/CQ features after filtering

From: Global gene expression profiling of Plasmodium falciparum in response to the anti-malarial drug pyronaridine

GO ID

Ontology

Term

q

m

T

K

genes

log_odds_ratio

p

GO:0005576

cellular_component

extracellular region

7

221

2198

10

PFA0765c//MAL7P1.57//PFE0065w//PFI0005w//PFF0855c//PFL2640c//PFL2620w

2.7995

0.000272

GO:0018995

cellular_component

host

7

220

2198

10

PFA0765c//MAL7P1.57//PFE0065w//PFI0005w//PFF0855c//PFL2640c//PFL2620w

2.806043

0.000272

GO:0020002

cellular_component

host cell plasma membrane

5

190

2198

10

PFA0765c//MAL7P1.57//PFI0005w//PFF0855c//PFL2640c

2.53212

0.01505

GO:0033643

cellular_component

host cell part

7

220

2198

10

PFA0765c//MAL7P1.57//PFE0065w//PFI0005w//PFF0855c//PFL2640c//PFL2620w

2.806043

0.000272

  1. Significantly enriched gene ontology terms were identified using the GOEAST tool. The top four significant terms are shown. GO ID is the identifier for the GO term in the Gene Ontology Project, Ontology represents the ontology category the GO term belongs to, term is the GO definition, q is the number of genes associated with the same GO ID in the data analyzed, m is the total number of genes associated with the listed GO ID in the genome, t is the total number of annotated genes for Plasmodium falciparum, k is the total number of features with gene annotations considered for analysis, genes are the Gene IDs sharing the same significant GO ID, log_odds_ratio is the log2 odds ratio of the GO ID enrichment and p is the FDR-adjusted p-value for significance.