Table 2 Number of clusters passing filters obtained and percentage aligning on the Plasmodium falciparum (3D7 strain) reference genome and on the human reference genome (Hg18)
Enzyme used | Number of passing clusters | % of passing clusters | % aligning on theP. falciparum reference genome (3D7) | % aligning on the human reference genome (Hg18) | % foreign DNA |
|---|---|---|---|---|---|
Illumina | 12 455 400 | 92.00 | 55.53 | 20.41 | 24.06 |
Herculase | 9 713 500 | 93.00 | 69.45 | 21.12 | 9.43 |
Average | 11 084 450 | 92.5 | 62.49 | 20.77 | 16.74 |