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Table 4 Number of orthologous groups in signal peptide group classes after optimization of signal peptide prediction parameters

From: Improving N-terminal protein annotation of Plasmodium species based on signal peptide prediction of orthologous proteins

Group Classes

Before optimization*

After optimization**

  

Negative

Positive

Mixed

Total

Negative

3454

-

0

8

3496

Positive

576

0

-

26

561

Mixed

289

50

11

-

262

Total

4319

50

11

34

4319

  1. *NN-Sum=3; Dscore=0.50; HMM probability=0.50.
  2. **NN-Sum=4; Dscore=0.48; HMM probability=0.90.
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Malaria Journal

ISSN: 1475-2875

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