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Table 4 Number of orthologous groups in signal peptide group classes after optimization of signal peptide prediction parameters

From: Improving N-terminal protein annotation of Plasmodium species based on signal peptide prediction of orthologous proteins

Group Classes Before optimization* After optimization**
   Negative Positive Mixed Total
Negative 3454 - 0 8 3496
Positive 576 0 - 26 561
Mixed 289 50 11 - 262
Total 4319 50 11 34 4319
  1. *NN-Sum=3; Dscore=0.50; HMM probability=0.50.
  2. **NN-Sum=4; Dscore=0.48; HMM probability=0.90.
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