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Table 2 PCR success rates and agreement of genotyping outcomes in field samples

From: Rapid diagnostic tests for molecular surveillance of Plasmodium falciparum malaria -assessment of DNA extraction methods and field applicability

  RDT PCR success rates N = 121 (%; CI 95%) Filter paper PCR success rates N = 121 (%; CI 95%) Kappa value
Pfcrt K76T 114 (94.2; 89.9-98.5) 104 (86.0; 79.6-92.3) 0.72
Pfmdr1 N86Y 112 (92.6; 87.8-97.4) 109 (90.1; 84.6-95.5) 0.85
Pfmdr1 Y184F 110 (90.9; 85.7-96.2) 107 (88.4; 82.6-94.3) 0.74
Pfmdr1 D1246Y 113 (93.4; 88.8-97.9) 107 (88.4; 82.6-94.3) 0.77
Pfmdr1 copy number 84 (69.4; 61.0-77.8) 77 (63.6; 54.9-72.4) -
  1. Analyses of single nucleotide polymorphisms and pfmdr1 gene copy numbers associated with anti-malarial drug resistance, from RDT and filter paper extracted DNA collected from 121 RDT positive field samples.