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Table 1 The PCR amplification primers list for pfmr1 and pfcrt used in the study

From: Survey of Plasmodium falciparum multidrug resistance-1 and chloroquine resistance transporter alleles in Haiti

Gene

PCR step

Primer

Sequence

Nucleotide location

pfmdr1

Nest 1

dr2

5-AGATGGTAACCTCAGTAT-3

27…44

dr3

5-AGTCTTTTCTCCACAATA-3

756…739

Nest 2

A4

5-TGTTGAAAGATGGGTAAAGAGCAGAAAGAG-3

24…54

A2

5-GTCAAACGTGCATTTTTTATTAATGACCAttTA-3

584…552

Nest 1

dr5

5-GAAATGTTTAAAGATCCAAG-3

2929…2949

dr6

5-CAGCAAACTTACTAACAC-3

3864…3848

Nest 2

1034f

5-AGAATTATTGTAAATGCAGCTTTATGGGGAcTC-3

3067…3099

1042r

5-AATGGATAATATTTCTCAAATGATAAcTTAGCA-3

3299…3267

1246f

5-ATGATCACATTATATTAAAAAATGATATGACAAAT-3

3545…3589

pfcrt

Pfcrt F1

5-CCGTTAATAATAAATACACGCAG-3

25…47

  

Pfcrt R2

5-ATGTTTTATATTGGTAGGTGGAAT-3

694…716