Gene | PCR step | Primer | Sequence | Nucleotide location |
---|---|---|---|---|
pfmdr1 | Nest 1 | dr2 | 5-AGATGGTAACCTCAGTAT-3 | 27…44 |
dr3 | 5-AGTCTTTTCTCCACAATA-3 | 756…739 | ||
Nest 2 | A4 | 5-TGTTGAAAGATGGGTAAAGAGCAGAAAGAG-3 | 24…54 | |
A2 | 5-GTCAAACGTGCATTTTTTATTAATGACCAttTA-3 | 584…552 | ||
Nest 1 | dr5 | 5-GAAATGTTTAAAGATCCAAG-3 | 2929…2949 | |
dr6 | 5-CAGCAAACTTACTAACAC-3 | 3864…3848 | ||
Nest 2 | 1034f | 5-AGAATTATTGTAAATGCAGCTTTATGGGGAcTC-3 | 3067…3099 | |
1042r | 5-AATGGATAATATTTCTCAAATGATAAcTTAGCA-3 | 3299…3267 | ||
1246f | 5-ATGATCACATTATATTAAAAAATGATATGACAAAT-3 | 3545…3589 | ||
pfcrt | Pfcrt F1 | 5-CCGTTAATAATAAATACACGCAG-3 | 25…47 | |
 |  | Pfcrt R2 | 5-ATGTTTTATATTGGTAGGTGGAAT-3 | 694…716 |