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Table 1 Frequencies of the 12 polymorphisms in the five oxidative pathway genes

From: Plasma advanced oxidative protein products are associated with anti-oxidative stress pathway genes and malaria in a longitudinal cohort

 

Genotypes

n

%

MAF

HWE

GSR

RS1002149(G/T)

 

GG

159

55.0

24.6

0.11

 

GT

118

40.8

  
 

TT

12

4.2

  

RS3594 (C/A)

 

CC

243

82.1

9.5

0.73

 

CA

50

16.9

  
 

AA

3

1.0

  

GCLC

RS10948751 (A/C)

 

AA

104

35.6

40.6

0.81

 

CA

139

47.6

  
 

CC

49

16.8

  

RS1901773 (G/C)

 

GG

69

25.6

48.1

0.46

 

CG

142

52.6

  
 

CC

59

21.9

  

RS7742367 (T/C)

 

TT

100

35.7

40.7

0.71

 

CT

132

47.1

  
 

CC

48

17.1

  

GSTP1

RS1695 (A/G)

 

AA

81

28.0

47.4

0.81

 

AG

142

49.1

  
 

GG

66

22.8

  

RS17593068 (T/G)

 

TT

79

28.0

49.1

0.15

 

TG

129

45.7

  
 

GG

74

26.2

  

RS6591256 (A/G)

 

AA

77

26.6

48.3

1.0

 

AG

146

50.3

  
 

GG

67

23.1

  

HMOX1

RS11555832 (T/C)

 

TT

107

37.4

0.40

0.31

 

CT

129

45.1

  
 

CC

50

17.5

  

RS17883725 (AG/DEL)

 

AG

81

29.2

49.5

0.02

 

AG.DEL

118

42.6

  
 

DEL.DEL

78

28.2

  

RS17885925 (T/C)

 

TT

275

92.3

3.9

1.0

 

CT

23

7.7

  

SOD2

RS4880 (T/C)

 

TT

95

32.3

42.3

0.55

 

CT

149

50.7

  
 

CC

50

17.0

  
  1. MAF Minor Allele Frequency.
  2. HWE Hardy-Weinberg Equilibrium.