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Table 1 Frequencies of the 12 polymorphisms in the five oxidative pathway genes

From: Plasma advanced oxidative protein products are associated with anti-oxidative stress pathway genes and malaria in a longitudinal cohort

  Genotypes n % MAF HWE
GSR
RS1002149(G/T)
  GG 159 55.0 24.6 0.11
  GT 118 40.8   
  TT 12 4.2   
RS3594 (C/A)
  CC 243 82.1 9.5 0.73
  CA 50 16.9   
  AA 3 1.0   
GCLC
RS10948751 (A/C)
  AA 104 35.6 40.6 0.81
  CA 139 47.6   
  CC 49 16.8   
RS1901773 (G/C)
  GG 69 25.6 48.1 0.46
  CG 142 52.6   
  CC 59 21.9   
RS7742367 (T/C)
  TT 100 35.7 40.7 0.71
  CT 132 47.1   
  CC 48 17.1   
GSTP1
RS1695 (A/G)
  AA 81 28.0 47.4 0.81
  AG 142 49.1   
  GG 66 22.8   
RS17593068 (T/G)
  TT 79 28.0 49.1 0.15
  TG 129 45.7   
  GG 74 26.2   
RS6591256 (A/G)
  AA 77 26.6 48.3 1.0
  AG 146 50.3   
  GG 67 23.1   
HMOX1
RS11555832 (T/C)
  TT 107 37.4 0.40 0.31
  CT 129 45.1   
  CC 50 17.5   
RS17883725 (AG/DEL)
  AG 81 29.2 49.5 0.02
  AG.DEL 118 42.6   
  DEL.DEL 78 28.2   
RS17885925 (T/C)
  TT 275 92.3 3.9 1.0
  CT 23 7.7   
SOD2
RS4880 (T/C)
  TT 95 32.3 42.3 0.55
  CT 149 50.7   
  CC 50 17.0   
  1. MAF Minor Allele Frequency.
  2. HWE Hardy-Weinberg Equilibrium.