Glucose-6-phosphate dehydrogenase polymorphisms and susceptibility to mild malaria in Dogon and Fulani, Mali

Table 2 G6PD polymorphisms and minor allele frequencies

SNP	Position	Major/Minor allele	Dogon	Fulani	Fst
SNP	Position	Major/Minor allele	(n = 375)	(n = 337)
rs915941	153626649	A/C	0.542	0.352	0.051
rs915942	153626738	G/A	0.435	0.277	0.043
rs762513	153675171	A/G	0.203	0.087	0.040
rs61042368	153755336	G/A	0.152	0.069	0.019
rs12389569	153757734	G/A	0.097	0.209	0.033
b36_153413623**	153760429	G/A	0.011	0.010	0.007
rs2230036	153760953	C/T	0.147	0.068	0.018
G6PD968	153761240	T/C	0.000	0.061	0.041
rs73573478	153761564	G/A	0.155	0.074	0.017
rs2515905	153762075	G/A	0.020	0.038	0.004
rs5986875	153762392	G/A	0.009	0.022	0.008
rs1050829 (376)	153763492	A/G	0.353	0.358	0.003
rs1050828 (202)	153764217	G/A	0.079	0.006	0.034
rs762516	153764663	C/T	0.105	0.112	0.001
rs73641103**	153769889	G/A	0.003	0.000	0.001
b36_153424232**	153771038	T/C	0.004	0.001	0.001
b36_153426354	153773160	A/C	0.027	0.007	0.006
b36_153426720**	153773526	A/G	0.004	0.003	0.004
rs5986992	153776107	C/A	0.000	0.022	0.017
rs5986997**	153827549	C/T	0.003	0.000	0.002
rs4898389	153827637	G/A	0.025	0.312	0.184
rs5986877	153828269	G/C	0.041	0.303	0.154
rs7879049	153829693	A/G	0.512	0.260	0.069
rs7053878	153834100	T/A	0.040	0.064	0.007
rs60030796	153836171	A/G	0.100	0.024	0.034

The following SNPs are monomorphic across both ethnic groups: rs33950507G, b36_153411172C, b36_153412566C, b36_153412620C, b36_153412734G, b36_153412861G, b36_153413455A, rs72554665C, b36_153413799G, b36_153414077G, b36_153414378G, b36_153414531C, b36_153414709C, b36_153414937T, b36_153415014T, 680G, b36_153415799G, rs5030868G, rs5030872A (542A), b36_153415904C, b36_153416019C, b36_153416656G, b36_153416679A, b36_153417405A, b36_153417417A, b36_153426313G, b36_153427408T, b36_153427466T, b36_153429686G, rs5986997C.
**SNPs with minor allele frequencies less than 1% in each group, and omitted from further analysis.
Bolded are the well known 202, 376, 542, 680 and 968 polymorphisms.