Skip to main content

Advertisement

Table 1 Diversity, recombination and selection parameters for the P. vivax msp1 icb5-6 fragment of Mexican and worldwide isolates

From: Genetic structure of Plasmodium vivax using the merozoite surface protein 1 icb5-6 fragment reveals new hybrid haplotypes in southern Mexico

Subfragment: 5′C sV1 M sV2 3′C Total
Worldwide
H 3 31 11 45 4 68
Hd 0.187 0.852 0.294 0.865 0.577 0.879
π 0.015 0.087 0.011 0.060 0.027 0.058
ϴ 0.023 0.050 0.029 0.040 0.021 0.039
INDELs 0 29 0 0 0 29
Rm 0 2 1 5 0 11
Mexico
H 3 6 3 9 1 10
Hd 0.604 0.769 0.385 0.912 0 0.923
π 0.054 0.093 0.006 0.019 0 0.055
ϴ 0.034 0.083 0.009 0.026 0 0.050
INDELs 0 10 0 0 0 10
Rm 0 0 0 0 - 2
  1. Mexican and other 155 worldwide sequences are included. H, haplotypes; Hd, haplotype diversity; π and ϴ, nucleotide diversity; INDELs, insertions/deletions; Rm, recombination events.