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Table 1 Diversity, recombination and selection parameters for the P. vivax msp1 icb5-6 fragment of Mexican and worldwide isolates

From: Genetic structure of Plasmodium vivax using the merozoite surface protein 1 icb5-6 fragment reveals new hybrid haplotypes in southern Mexico

Subfragment:

5′C

sV1

M

sV2

3′C

Total

Worldwide

H

3

31

11

45

4

68

Hd

0.187

0.852

0.294

0.865

0.577

0.879

π

0.015

0.087

0.011

0.060

0.027

0.058

ϴ

0.023

0.050

0.029

0.040

0.021

0.039

INDELs

0

29

0

0

0

29

Rm

0

2

1

5

0

11

Mexico

H

3

6

3

9

1

10

Hd

0.604

0.769

0.385

0.912

0

0.923

π

0.054

0.093

0.006

0.019

0

0.055

ϴ

0.034

0.083

0.009

0.026

0

0.050

INDELs

0

10

0

0

0

10

Rm

0

0

0

0

-

2

  1. Mexican and other 155 worldwide sequences are included. H, haplotypes; Hd, haplotype diversity; π and ϴ, nucleotide diversity; INDELs, insertions/deletions; Rm, recombination events.
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Malaria Journal

ISSN: 1475-2875

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