Genotype | Detection assay* | Sensitivity (95% confidence level) | Specificity (95% confidence level) | |||||||
---|---|---|---|---|---|---|---|---|---|---|
 | Sequencing | AS-PCR | TaqMan- qPCR | AllGlo-qPCR | AS-PCR | TaqMan- qPCR | AllGlo-qPCR | AS-PCR | TaqMan- qPCR | AllGlo-qPCR |
TTG/TTG | 62 | 59 | 62 | 62 | 95% (87%,98%) | 100% (94%,100%) | 100% (94%,100%) | 100% (96%,100%) | 100% (96%,100%) | 100% (96%,100%) |
TTT/TTT | 61 | 60a | 56 | 59 | 89% (78%,94%) | 92% (82%,96%) | 97% (89%,99%) | 94% (87%,97%) | 100% (96%,100%) | 100% (96%,100%) |
TGT/TGT | 1 | 2b | 1 | 1 | 100% (21%,100%) | 100% (21%,100%) | 100% (21%,100%) | 99% (96%,99.9%) | 100% (98%,100%) | 100% (98%,100%) |
TTG/TTT | 3 | 5c | 3 | 3 | 67% (21%,94%) | 100% (44%,100%) | 100% (44%,100%) | 98% (94%,99%) | 100% (98%,100%) | 100% (98%,100%) |
TTG/TGT | 1 | 2d | 1 | 1 | 100% (21%,100%) | 100% (21%,100%) | 100% (21%,100%) | 99% (96%,99.9%) | 100% (98%,100%) | 100% (98%,100%) |
TTT/TGT | 30 | 30e | 35f | 32g | 77% (59%,88%) | 100% (89%,100%) | 100% (89%,100%) | 95% (89%,97%) | 96% (91%,98%) | 98% (94%,99.6%) |
Total | 158 | 158 | 158 | 158 | Â | Â | Â | Â | Â | Â |
Accuracy** | - | 88.61% | 96.84% | 98.73% | Â | Â | Â | Â | Â | Â |