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Table 1 Overall polymorphism of the 15 Plasmodium vivax microsatellite loci assessed in San Carlos community

From: Population structure and spatio-temporal transmission dynamics of Plasmodium vivax after radical cure treatment in a rural village of the Peruvian Amazon

Locus

Total number of alleles

Allele size (range in bp)

He

Allelic richness

Polyclonal samples/locus (%)

Average alleles/locus

MS1

4

234 - 242

0.1

2.94

0%

1.1

MS2

5

187 - 207

0.6

4.89

13.8%

1.1

MS3

2

181 - 184

0.13

1.99

6.9%

1.1

MS4

5

165 - 198

0.65

4.62

58.6%

1.2

MS5

2

166 - 172

0.29

2

6.9%

1.1

MS6

5

208 - 244

0.61

4.38

17.2%

1.1

MS7

3

142 - 148

0.47

2.98

17.2%

1.1

MS8

4

252 - 271

0.6

4

24.1%

1.1

MS9

5

155 - 172

0.66

4.94

20.7%

1.1

MS10

4

210 - 266

0.13

3.19

0%

1.1

MS12

6

181 - 332

0.55

5.14

27.6%

1.1

MS15

4

210 - 256

0.59

3.98

31%

1.1

MS16

7

193 - 350

0.67

5.92

13.8%

1.1

MS20

7

194 - 241

0.65

6.28

24.1%

1.1

Pv6635

6

184 - 202

0.67

5.34

27.6%

1.1

  1. A total of 174 P. vivax infections were analysed, including 35 D0 and 139 recurrent samples. The expected heterozygosity (He) and the allelic richness were calculated only for monoclonal samples (n = 136).