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Table 1 Overall polymorphism of the 15 Plasmodium vivax microsatellite loci assessed in San Carlos community

From: Population structure and spatio-temporal transmission dynamics of Plasmodium vivax after radical cure treatment in a rural village of the Peruvian Amazon

Locus Total number of alleles Allele size (range in bp) He Allelic richness Polyclonal samples/locus (%) Average alleles/locus
MS1 4 234 - 242 0.1 2.94 0% 1.1
MS2 5 187 - 207 0.6 4.89 13.8% 1.1
MS3 2 181 - 184 0.13 1.99 6.9% 1.1
MS4 5 165 - 198 0.65 4.62 58.6% 1.2
MS5 2 166 - 172 0.29 2 6.9% 1.1
MS6 5 208 - 244 0.61 4.38 17.2% 1.1
MS7 3 142 - 148 0.47 2.98 17.2% 1.1
MS8 4 252 - 271 0.6 4 24.1% 1.1
MS9 5 155 - 172 0.66 4.94 20.7% 1.1
MS10 4 210 - 266 0.13 3.19 0% 1.1
MS12 6 181 - 332 0.55 5.14 27.6% 1.1
MS15 4 210 - 256 0.59 3.98 31% 1.1
MS16 7 193 - 350 0.67 5.92 13.8% 1.1
MS20 7 194 - 241 0.65 6.28 24.1% 1.1
Pv6635 6 184 - 202 0.67 5.34 27.6% 1.1
  1. A total of 174 P. vivax infections were analysed, including 35 D0 and 139 recurrent samples. The expected heterozygosity (He) and the allelic richness were calculated only for monoclonal samples (n = 136).