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Table 2 Details of PfWARP and Pfs28 polymorphisms and geographic origin for each isolate

From: Limited polymorphism in Plasmodium falciparum ookinete surface antigen, von Willebrand factor A domain-related protein from clinical isolates

Isolate number Geographic origina PfsWARP sequenceb Pfs28 sequencec
Nucleotide sequence 1221576–1221581 Nucleotide sequence 1221645–1221650 Nucleotide sequence 1221885–1221890 Nucleotide sequence 270–275
3D7 Netherlands GTCT TT GTAG TC CAAA CA TTTAA A
FC27 Papua New Guinea GTCC TT GTAT TC CAAG CA Xd
FCR3 Central/South America GTCC TT GTAT TC CAAG CA Xd
1 Uganda GTCT TT GTAC TC CAAA CA TTTAA A
2 Papua New Guinea GTCC TT GTAT TC CAAG CA TTTAG A
3 Papua New Guinea GTCC TT GTAT TC CAAG CA TTTAG A
4 Ivory Coast GTCT TT GTAT TG CAAA CA Xd
5 Papua New Guinea GTCC TT GTAT TC CAAG CA TTTAG A
6 Papua New Guinea GTCC TT GTAT TC CAAG CA Xd
7 Tanzania GTCC TT GTAT TC CAAG CA TTTAG A
8 Tanzania GTCC TT GTAT TC CAAG CA TTTAA A
9 Papua New Guinea GTCC TT GTAT TC CAAG CA Xd
10 Solomon Islands GTCC TT GTAT TC CAAG CA TTTAG A
11 Ghana GTCT TT GTAT TG CAAA CA TTTAA A
12 Papua New Guinea GTCC TT GTAT TC CAAG CA TTTAG A
13 Papua New Guinea GTCT TT GTAG TC CAAA CA TTTAG A
14 Papua New Guinea GTCT TT GTAT TG CAAG CA TTTAA A
15 Pakistan GTCC TT GTAT TC CAAG CA TTTAG A
16 Papua New Guinea GTCC TT GTAT TC CAAG CA TTTAG A
17 Papua New Guinea GTCC TT GTAT TC CAAG CA TTTAG A
18 Kenya GTCT TT GTAG TC CAAA CA TTTAA A
19 Papua New Guinea GTCC TT GTAT TC CAAG CA TTTAA A
20 Papua New Guinea Xd Xd Xd TTTAG A
21 Togo Xd Xd Xd TTTAA A
22 Papua New Guinea Xd Xd Xd TTTAA A
23 Tanzania Xd Xd Xd TTTAA A
24 Zimbabwe Xd Xd Xd TTTAA A
25 Ghana Xd Xd Xd TTTAA A
CAMPe SE Asia Xd Xd Xd TTTAA A
LE5e Africa Xd Xd Xd TTTAA A
LF4e Africa Xd Xd Xd TTTAA A
HB3e Central/South America Xd Xd Xd TTTAA A
7G8e Central/South America Xd Xd Xd TTTAA A
Dd2e SE Asia Xd Xd Xd TTTAG A
2D11e SE Asia Xd Xd Xd TTTAG A
2 Philippine isolatese SE Asia Xd Xd Xd TTTAA A
30 Philippine isolatese SE Asia Xd Xd Xd TTTAG A
  1. a The precise geographic origin of laboratory parasite strains is unclear in some instances
  2. b Variable nucleotide positions for PfWARP are indicated in bold (GenBank: NC_004329 Region: 1221207...1222079).
  3. c Variable nucleotide positions for Pfs28 are indicated in bold (GenBank: L25843).
  4. d The symbol "X" is used to indicate that the isolate was not tested.
  5. e Theses isolates, laboratory strains and their geographic origin are cited as given in the paper by Hafalla et al [12].
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