Table 2 Distribution of amino-acid repeats in PfHRP2 and PfHRP3 from parasites collected throughout Madagascar in 2006.
No. of amino acid repeats in PfHRP2 and PfHRP3 | Region and City | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
North | Centre | South | Total | ||||||||||||||
ATS | SBV | ATH | MJG | MAE | STM | TDD | MIA | MHT | MOR | FNR | MNK | IHO | TLR | EJE | |||
1 | AHHAHHVAD | 1–5 | 1–5 | 1–6 | 1–5 | 1–5 | 2 | 1–5 | 1–4 | 1–3 | 1–4 | 2–4 | 3 | 1–4 | 1–4 | 1–4 | 1–6 |
1 | AHHAHHVAD | 1 | 1–2 | 1–3 | 1–3 | 1 | 1 | 1–3 | 1–3 | 1–2 | 1 | 1–2 | 1 | 1–4 | 1 | 1 | 1–4 |
2 | AHHAHHAAD | 8–16 | 11–13 | 10–14 | 4–15 | 8–14 | 14 | 10–14 | 11–13 | 11–12 | 10–13 | 8–15 | 12 | 8–14 | 7–14 | 7–15 | 4–16 |
3 | AHHAHHAAY | 0–2 | 1–2 | 1–2 | 0–2 | 0–2 | 0 | 1–2 | 1–2 | 1–2 | 1–2 | 1–2 | 0 | 1–2 | 1–3 | 0–3 | 0–3 |
4 | AHH | 0–1 | 0–1 | 0–1 | 0–3 | 0–2 | 0 | 0–1 | 0–1 | 0–1 | 0–1 | 0 | 1 | 0 | 0–1 | 0–1 | 0–3 |
4 | AHH | 1 | 1 | 1–2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1–2 |
5 | AHHAHHASD | 0–1 | 1 | 0–3 | 0–1 | 0–1 | 1 | 0–2 | 0–2 | 1 | 0–1 | 0–3 | 0 | 0–2 | 1–2 | 0–2 | 0–3 |
6 | AHHATD | 3–5 | 3–5 | 2–5 | 2–7 | 2–6 | 2 | 2–8 | 2–6 | 3–5 | 3–8 | 1–3 | 3 | 1–3 | 2–4 | 2–5 | 1–8 |
7 | AHHAAD | 2–10 | 4–7 | 4–11 | 3–8 | 4–8 | 6 | 3–9 | 3–8 | 5–8 | 3–10 | 4–13 | 6 | 5–10 | 4–9 | 3–8 | 2–13 |
7 | AHHAAD | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0–1 | 1 | 0–1 |
8 | AHHAAY | 1–2 | 1–2 | 1–2 | 1–2 | 1–2 | 1 | 0–2 | 0–2 | 1–2 | 0–2 | 0–2 | 3 | 0–2 | 1–2 | 1–2 | 0–2 |
9 | AAY | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
10 | AHHAAAHHATD | 0–2 | 0–2 | 1–3 | 1–3 | 1–2 | 2 | 0–2 | 0–2 | 2–3 | 1–2 | 0–2 | 1 | 1–2 | 0–2 | 0–2 | 0–3 |
11 | AHN | 0 | 0 | 0 | 0–1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0–1 |
12 | AHHAAAHHEAATH | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
13 | AHHASD | 0–1 | 0–2 | 0–1 | 0 | 0–1 | 0 | 0–1 | 0–1 | 0 | 0–1 | 0 | 0 | 0–1 | 0 | 0–1 | 0–2 |
14 | AHHAHHATD | 0–2 | 0 | 0–1 | 0–1 | 0–1 | 0 | 0–1 | 0–1 | 0–1 | 0–1 | 0 | 0 | 0–1 | 0–1 | 0–1 | 0–2 |
15 | AHHAAY | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0–1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0–1 |
16 | AAY | 8–14 | 8–13 | 7–13 | 9–13 | 8–18 | 10–14 | 10–14 | 10–16 | 8–14 | 8–15 | 8–14 | 15 | 10–14 | 8–15 | 7–14 | 7–18 |
17 | AHHAAAHHATD | 1–8 | 5–9 | 5–8 | 4–7 | 5–8 | 4–8 | 5–7 | 3–7 | 5–10 | 0–7 | 4–10 | 6 | 4–8 | 4–6 | 3–8 | 0–10 |
18 | AHN | 1–3 | 1–4 | 1–3 | 1–4 | 1–3 | 2–3 | 1–3 | 1–3 | 2 | 0–3 | 2 | 2 | 1–2 | 1–3 | 2–3 | 0–4 |