Table 2 Comparison of results by RFLP-dHPLC and by sequence analysis of SNP from cytochrome b gene in Pahoy
RFLP-dHPLC | sequence analysis of SNP from cytochrome b gene | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
neg | F | V | M | FM | FO | FV | VM | VO | FVM | FVO | Total | |
neg | 21 | 3 | 2 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 29 |
F | 5 | 50 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 56 |
V | 0 | 0 | 8 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 10 |
M | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 4 |
O | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
FM | 0 | 1 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 1 | 0 | 7 |
FO | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
FV | 0 | 2 | 2 | 0 | 0 | 0 | 12 | 0 | 0 | 1 | 0 | 17 |
VM | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 |
VO | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 |
FVM | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 4 |
FVO | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 |
Total | 27 | 56 | 13 | 4 | 5 | 1 | 17 | 2 | 1 | 6 | 2 | 134 |