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Table 1 Number of alleles and genetic diversity (He) by locus and population (N = 94 monoclonal infections).

From: Multilocus genotyping reveals high heterogeneity and strong local population structure of the Plasmodium vivax population in the Peruvian Amazon

  Number of Alleles/locus Allelic Richness He
Populations A1 A2 B C A1 A2 B C     
  n = 15 n = 9 n = 39 n = 31 h = 11 h = 7 h = 19 h = 5 A1 A2 B C
MS1 4 3 3 2 3.96 2.99 2.15 1.45 0.77 0.56 0.2 0.07
MS2 5 3 4 4 4.74 2.99 3.33 3.16 0.79 0.67 0.65 0.57
MS3 3 3 3 2 2.96 2.99 2.99 1.86 0.59 0.42 0.67 0.19
MS4 5 4 3 3 4.62 3.99 2.73 2.71 0.73 0.81 0.36 0.55
MS5 2 2 2 2 1.96 1.99 1.96 1.45 0.25 0.22 0.27 0.07
MS6 6 3 5 5 5.51 2.99 4.1 3.61 0.83 0.67 0.64 0.59
MS7 3 2 1 2 2.58 2 1 2 0.26 0.56 0 0.43
MS8 5 5 9 3 4.55 5 5.73 2.45 0.73 0.89 0.74 0.47
MS9 5 4 6 4 4.34 3.99 4.81 3.3 0.56 0.69 0.74 0.59
MS10 6 3 4 2 5.34 2.99 3.46 1.71 0.8 0.42 0.53 0.13
MS12 6 5 7 3 5.68 4.97 4.71 2.45 0.85 0.72 0.64 0.47
MS15 6 6 6 4 5.5 5.97 3.86 3.16 0.81 0.89 0.51 0.57
MS16 8 6 7 4 7.25 5.97 4.91 3.3 0.91 0.83 0.71 0.59
MS20 6 6 5 4 5.47 5.97 4.44 3.41 0.77 0.89 0.75 0.59
Pv6635 5 4 6 4 4.34 3.99 4.75 3.3 0.56 0.69 0.72 0.59
Pvsal 6 6 5 5 5.16 5.97 4.45 3.61 0.74 0.89 0.69 0.59
Mean 4.81 4.44 4.75 3.31 4.62 4.05 3.71 2.64 0.66 0.69 0.55 0.44
  1. h: number of unique haplotypes