From: Assessment of an automated capillary system for Plasmodium vivax microsatellite genotyping
Pop | Padrecocha | San Jose de Lupuna | Santo Tomas | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Locus | N | Na | MAF (%) | He | N | Na | MAF (%) | He | N | Na | MAF (%) | He |
MS1 | 70 | 5 | 2 (40) | 0.659 | 55 | 6 | 4 (67) | 0.52 | 63 | 6 | 4 (67) | 0.467 |
MS2 | 77 | 7 | 4 (57) | 0.651 | 56 | 8 | 3 (38) | 0.812 | 64 | 8 | 3 (38) | 0.8 |
MS3 | 84 | 2 | 0 (0) | 0.413 | 53 | 6 | 2 (33) | 0.761 | 72 | 4 | 2 (50) | 0.476 |
MS4 | 86 | 9 | 4 (44) | 0.826 | 55 | 6 | 3 (50) | 0.71 | 77 | 9 | 4 (44) | 0.822 |
MS5 | 87 | 4 | 2 (50) | 0.539 | 56 | 2 | 0 (0) | 0.341 | 78 | 2 | 0 (0) | 0.399 |
MS6 | 74 | 7 | 2 (29) | 0.811 | 53 | 6 | 1 (17) | 0.816 | 77 | 6 | 2 (33) | 0.766 |
MS7 | 77 | 5 | 3 (60) | 0.536 | 56 | 4 | 3 (75) | 0.17 | 66 | 3 | 2 (67) | 0.296 |
MS8 | 74 | 11 | 4 (36) | 0.873 | 49 | 12 | 6 (50) | 0.854 | 76 | 13 | 7 (54) | 0.841 |
MS9 | 72 | 11 | 3 (27) | 0.894 | 53 | 9 | 2 (22) | 0.864 | 73 | 12 | 5 (42) | 0.866 |
MS10 | 85 | 12 | 8 (67) | 0.734 | 49 | 11 | 5 (45) | 0.838 | 58 | 13 | 8 (62) | 0.817 |
MS12 | 81 | 11 | 7 (64) | 0.779 | 52 | 13 | 4 (31) | 0.912 | 76 | 10 | 4 (40) | 0.838 |
MS15 | 84 | 8 | 3 (38) | 0.81 | 55 | 7 | 3 (43) | 0.789 | 75 | 7 | 3 (43) | 0.739 |
MS16 | 70 | 18 | 9 (50) | 0.902 | 48 | 15 | 7 (47) | 0.895 | 62 | 15 | 6 (40) | 0.901 |
MS20 | 82 | 8 | 2 (25) | 0.844 | 55 | 12 | 3 (25) | 0.905 | 68 | 13 | 4 (31) | 0.9 |
Pv6635 | 84 | 12 | 4 (33) | 0.891 | 54 | 9 | 4 (44) | 0.82 | 73 | 9 | 4 (44) | 0.814 |