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Table 5 Average microsatellite substitution rates (events/month) estimated using the PL1 model implemented in BEAST

From: Longitudinal analysis of Plasmodium falciparum genetic variation in Turbo, Colombia: implications for malaria control and elimination

Loci POLYa TA60 ARA2 Pfg377 PfPK2 TA109 TA81 TA42 2490
Global He 0.57 0.0078 0.58 0 0.65 0.0078 0.48 0.03 0.52
Mean 3.77E−02 0.1393 1.06E−02 0.2046 3.25E−02 0.4292 5.35E−03 8.00E−03 2.18E−02
Std err of mean 1.11E−03 4.75E−03 3.89E−04 7.57E−03 7.09E−04 2.19E−02 1.26E−04 3.77E−04 5.91E−04
Median 3.40E−02 8.97E−02 9.57E−03 0.1424 3.00E−02 0.3233 4.72E−03 6.39E−03 1.99E−02
95 % HPD lower 9.01E−03 6.40E−04 1.78E−03 2.86E−03 1.04E−02 5.20E−05 8.26E−04 1.42E−04 4.68E−03
95 % HPD upper 7.37E−02 0.4273 2.13E−02 0.5831 6.09E−02 1.1515 1.16E−02 2.07E−02 4.29E−02
Effective sample size (ESS) 275.038 1230.751 202.309 794.978 393.838 322.162 595.85 286.73 335.739
  1. The migrant haplotype was excluded from calculations