Table 2 Peptide composition of the six predicted AMA1 HLA A- and B-binding peptide pools

Ap1

LLSAFEFTY^b (B07)^b (A03, B58)^c GQNYWEHPY^b (B27)^c

KLYCVLLLSA^b (A03)^b (A02, A03, A30)^c SAFEFTYMI^b (A01)^b

EFTYMINFGR^b (A03)^c DVYRPINEHR^{b, c} (A03)^c

LYCVLLLSAF^b (B07)^b

YPLHQEHTY^{b, c}

FEFTYMINF ^{a, c} (B27)^c YEYPLHQEH ^{a, c} (B27)^c

Ap2

NYMGNPWTEY^b (B07, B44)^b (A01A24, B27)^c

NLFSSIEIV^{b, c} YMGNPWTEYM^{b, c} (A01, B44)^b (B27)^c

LFSSIEIVER^{b, c}

DENTLQHAY^{b, c} (A01, B07)^b

QEQNLFSSI^b (B27)^c IEIVERSNY^{b, c}

Ap3

YMAKYDIEEV^{b, c} (B27)^c

TQYRLPSGK^{b, c} (A34, A01A03)^c

Ap4

TLDEMRHFY ^a (B07)^b (A03, A01)^c MRHFYKDNKY ^a (B27)^c

LTPVATGNQY^b

MSPMTLDEMR^b (B07)^b

TLDEMRHFYK^b (A01)^b (A01)^c

QYLKDGGFAF^b (A01, A02, B07, B44)^c

TEPLMSPMTL^b (B07)^b

Ap6

DISFQNYTY^b (B07)^b (B27, B58)^c

NSMFCFRPAK^{b, c} (A02)^{b, c} (A03, A01A03, A30, B27)^c SFQNYTYLSK^b

CPRKNLQNA^{b, c}

Ap7

LSASDQPKQY^b (A01, B27, B58)^c

IPHVNEFPA^{b, c}

NEFPAIDLF ^{a, c} FECNKLVFEL^{b, c} (A02, B44, B27)^c

Ap8

HGKGYNWGNY^b (A30, B27)^c

TQKCEIFNV ^a (B27)^c FLPTGAFKA^{b, c} ETQKCEIFNV^{a, c} CLINNSSYI^a (B27)^c

RYKSHGKGY^b (A01)^b (A01A03, A30, B27)^c SAFLPTGAFK^{b, c} (B07)^b (B27)^c

TETQKCEIF^b

Ap9

VENNFPCSLY^b (B44)^b (B27, B44)^c

CLINNSSYI^{b, c} (B27)^c

SLYKDEIMK^{b, c} (B27)^c (B27, A01A03)^c

FPCSLYKDEI^b

HPIEVENNF^{b, c}

VENNFPCSL^b

VENNFPCSLY^{b, c} (A01)^b (B27, B44)^c

Ap10

EVTSNNEVVV^{b, c} IIIASSAAV^{b, c}

FISDDKDSLK^{b, c} (A02)^b,c RFFVCKCVER^{b, c}

KPTYDKMKII^{b, c}

NEVVVKEEY ^{a, c}

Ap11

AVLATILMV^{b, c} VLATILMVYL^{b, c} (A01, A03)^b (A30)^c

VLATILMVY^b (A01)^c TILMVYLYKR^b ILMVYLYKRK^b (A02)^b (A03)^c

Ap12

TTPVLMEKPY^b (B07)

EASFWGEEKR^b (A34)^c HTTPVLMEK^{b, c}

RASHTTPVL^b (A02, B07, B27, B58)^c