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Table 1 Estimates of DNA diversity, selection, and neutrality tests of PkRAP-1 in Malaysia

From: Genetic diversity and natural selection in the rhoptry-associated protein 1 (RAP-1) of recent Plasmodium knowlesi clinical isolates from Malaysia

PkRAP-1 n S Hd ± SD π ± SD dN ± SE dS ± SE dN/dS Z test Tajima’s D Fu and Li’s D
Exon 1 34 276 0.818 ± 0.054 0.00915 ± 0.00089 0.00574 ± 0.00352 0.02253 ± 0.01104 0.25477 dN = dS −0.44307
(P > 0.10)
−0.47531
(P > 0.10)
Exon 2 34 1929 0.993 ± 0.009 0.01353 ± 0.00102 0.00894 ± 0.00145 0.03274 ± 0.00591 0.27306 dN < dS
(P < 0.05)
−0.20877
(P > 0.10)
−0.22130
(P > 0.10)
Total CDS 34 2205 0.995 ± 0.009 0.01298 ± 0.00091 0.00854 ± 0.00126 0.03137 ± 0.00483 0.27223 dN < dS
(P < 0.05)
−0.23957
(P > 0.10)
−0.26919
(P > 0.10)
  1. n number of sequences, S number of sites, Hd haplotype diversity, π observed average pairwise nucleotide diversity, d N rate of non-synonymous substitutions per non-synonymous site, d S rate of synonymous substitutions per synonymous site