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Table 1 pvron4 genetic diversity estimators calculated from single nucleotide polymorphism and sequence length polymorphism

From: Size polymorphism and low sequence diversity in the locus encoding the Plasmodium vivax rhoptry neck protein 4 (PvRON4) in Colombian isolates

Single nucleotide polymorphism Sequence length polymorphism
n Sites Ss S Ps H Hd θw π Sites No InDels H Hd π
Colombian and reference isolates
80 2542 8 3 5 11 0.67 7.6 × 10−4 4.3 × 10−4 408 21 21 0.82 9.9 × 10−4
Colombian isolates
73 2464 5 0 5 8 0.65 4.7 × 10−4 4.1 × 10−4 289 15 15 0.78 8.0 × 10−4
  1. Genetic diversity estimators were calculated using the reference sequences obtained from databases together with Colombian isolates as well as for just Colombian isolates’ sequences
  2. n number of isolates analysed, sites total of sites analysed excluding gaps, Ss number of segregating sites, S number of singleton sites, Ps number of informative-parsimonious sites, H number of haplotypes, Hd haplotype diversity, θ w Watterson estimator, π nucleotide diversity per site