From: Characterization of Plasmodium falciparum ATP-dependent DNA helicase RuvB3
Oligonucleotide type | Sequence: 5′-3′ |
---|---|
1. 17mer | 5′-GTAAAACGACGGCCAGT-3′ |
2. 32mer-I | 5′-TTTTTTTTTTTTTTTGTTTTCCCAGTCACGAC-3′ |
3. 32mer-II | 5′-GTTTTCCCAGTCACGACTTTTTTTTTTTTTTT-3′ |
4. 34mer | 5′-ATAAAAATTTTTAGAACCCTCATATATTTTAAAT-3′ |
5. 41mer-I | 5′-AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG-3′ |
6. 41mer-II | 5′-CAGGTCGACTCTAGAGGATCCCCGGGTACCGAGCTCGAATT-3′ |
7. 47mer | 5′-TTTTTTTTTTTTTTTGTTTTCCCAGTCACGACTTTTTTTTTTTTTTT-3′ |
DNA duplex | Component |
---|---|
Short oligonucleotide | M13mp18Â +Â 17mer |
Long oligonucleotide | M13mp18Â +Â 34 mer |
Blunted end | 41 mer-IÂ +Â 41 mer-II |
3′overhang | M13mp18 + 32 mer-II |
5′overhang | M13mp18 + 32 mer-I |
3′and 5′ overhang | M13mp18 + 47 mer |