Table 1 Primer and probe sequences
From: Evidence of non-Plasmodium falciparum malaria infection in Kédougou, Sénégal
Gene | Primer name | Primer sequence (5′– >3′) | Amplicon size (bp) | Specificity | Reference |
|---|---|---|---|---|---|
Porbp2 | Porbp2TMfwd | TTGCAAACAAAAGTGCTCC | 120 | P. ovale | [2] |
Porbp2TMrev | CCTAATTCTCTTTGT(G/A)CCC | ||||
Potra | PoTRA fwd3 | GCACAAAAATGGTGCTAACC | 787 | P. ovale | [2] |
PoTRA rev3 | ATCCATTTACCTTCCATTGC | ||||
PoTRA fwd5 | ACGGCAAACCCGATAAACAC | 245–355 | |||
PoTRA rev5 | GTGTTTGTAGTATTTACAGG | ||||
Plasmepsin 4 | AIRSAMA_Fwd | ACTGACACTGATGATTTAGAACCCATTT | 1353 | P. vivax | |
AIRSAMA_Rev | TGGAGAGATCTTTCCATCCTAAACCT | ||||
AIRSAMA_Probe | CAGCAGCGTCGAGTTT | ||||
Plasmepsin 4 | Ovale_CCRR9V5_Fwd | ACTCTTGGTTATTTGTCTGCACCTT | 1353 | P. ovale | |
Ovale_CCRR9V5_Rev | CTATGTTACCATAAACAGGTTCTAAATCATCTGT | ||||
Ovale_CCRR9V5_Probe | TCAGTTGCTTCAACAAATTT | ||||
PF3D7_0718800 | pf07_0076_Fwd | CGACCCTGATGTTGTTGTTGGA | 79 | P. falciparum | [11] |
pf07_0076_Rev | GGCTTTTTTCCATTTCTGTAGTTAAGATTCA | ||||
pf07_0076_Probe | CAACAGCTCCAAAATAT | ||||
Plasmepsin 4 | Malariae_CCWR2K1_Fwd | TTCAGTCAGGATATGTAAAACAAAATTATTTAGGTAGT | 1356 | P. malariae | |
Malariae_CCWR2K1_Rev | CCTACTTCCCCTTCACCATAAAACA | ||||
Malariae_CCWR2K1_Probe | TCGTCTAGTTCTATTACGTCATTTTC |