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Table 5 Linkage disequilibrium

From: Chloroquine efficacy for Plasmodium vivax in Myanmar in populations with high genetic diversity and moderate parasite gene flow

Site

All infections

Low complexitya

Unique MLGs

N

I SA

N

I SA

N

I SA

Shwegyin

35

0.023*

25

0.020*

34

0.010NS

Myawaddy

33

0.071*

26

0.105*

31

0.059*

Kawthoung

27

0.045*

19

0.021*

27

0.045*

Myanmar

103

0.015*

75

0.020*

101

0.012*

  1. Only samples with no missing data at all nine loci are included in the analyses
  2. NS Not significant (P > 0.05), * P < 0.05, ** P < 0.01, *** P < 0.001
  3. aRestricted MLGs from samples with no more than one multi-allelic locus