Table 3 Probable B cell epitopes of MSP1 block 2 and MSP1-19 variants
# | Epitope sequence | Length (AA) | Subtype | Mean residue score |
|---|---|---|---|---|
Potential B cell epitopes for K1 | ||||
 1 | ASAQSGTSGTSGTSAQSGTSGTSGTSAQSGT SGTSGTSGTSGPSGPSGPSGPSGPSGTSPSSR | 63 | K1H6 | 2.226 |
 2 | ASAQSGTSGTSGTSGPSGPSGTSPSSR | 27 | K1H13 | 2.216 |
 3 | ASAQSGTSGTSGPSGTSGPSGTSPSSR | 27 | K1H12 | 2.216 |
 4 | ASAQSGTSGTSGTSGTSGPSGPSGTSPSSR | 30 | K1H10 | 2.201 |
 5 | SARSGTSGTSGTSGPSGPSGTSPSSR | 26 | K1H14 | 2.200 |
 6 | ASAQSGTSGTSGTSAQSGTSGTSGTSGTSGTS GPSGTSGTSGTSGTSGTSGPSGPSGPSGTSPSSR | 66 | K1H7 | 2.199 |
 7 | ASAQSGTSGTSGTSGTSGTSGTSGPSGPSGTSPSSR | 36 | K1H9 | 2.179 |
 8 | SNTSSGTSPPADA | 13 | K1H13 | 2.173 |
 9 | ASAQSGTSGTSGTSGTSGTSGTSGTSGTSGTSGPSGPSGTSPSSR | 45 | K1H8 | 2.157 |
 10 | ASAQSGTSGTSGTSAQSGTSGTSGTSGTSGTSGPSGPSGTSPSSR | 45 | K1H15 | 2.111 |
 11 | SNTSSGASPPADA | 13 | K1H1, K1H2, K1H3, K1H4, K1H5, K1H6, K1H8, K1H9, K1H10, K1H11, K1H14, K1H15, K1H16 | 2.092 |
 12 | ASAQSGTSGTSGTSAQSGTSGTSAQSGTSGTS GTSGPSGPSGTSPSSR | 48 | K1H16 | 2.065 |
 13 | ASTQSGASAQSGASAQSGASAQSGTSGTSGPSGPSGTSPSSR | 42 | K1H5 | 1.962 |
 14 | ASAQSGASAQSGASAQSGASAQSGTSGTSGPSGPSGTSPSSR | 42 | K1H4 | 1.944 |
 15 | ASAQSGTSGTSGTSAQSGTSGTSPSSR | 27 | K1H11 | 1.890 |
 16 | ASAQSGASAQSGASAQSGASAQSGASAQSGTS GPSGPSGTSPSSR | 45 | K1H3 | 1.883 |
 17 | ASAQSGASAQSGASAQSGASAQSGASAQSGAS AQSGTSGPSGPSGTSPSSR | 51 | K1H2 | 1.845 |
 18 | ASAQSGASAQSGASAQSGASAQSGASAQSGAS AQSGASAQSGTSGPSGPSGTSPSSR | 57 | K1H1 | 1.815 |
Potential B cell epitopes for MAD20 | ||||
 1 | PDAANPSDNSSDSDAK | 16 | MH12 | 2.025 |
 2 | AVTTSTPGSKGSGGSVA SGGSGGSGGSGGSGGP | 33 | MH9 | 1.961 |
 3 | GGSGNSRRTNPSDNSSDSDAK | 21 | MH3, MH9, MH11, MH13, MH15, MH17, MH24 | 1.908 |
 4 | AVTTSTPGSGGSVTSGGSGGSGGSGG SVASGGSGNSRRTNPSDNSSDSDAK | 51 | MH23 | 1.896 |
 5 | VASGGSGNSRRTNPSDNSSDSDAK | 24 | MH1, MH5, MH6, MH7, MH10, MH19, MH21, MH22 | 1.872 |
 6 | GGSGGSVASGGSGNSRRTNPSDNSSDSDAK | 30 | MH14 | 1.869 |
 7 | GSVASGGSGNSRRTNPSDNSSDSDAK | 26 | MH4 | 1.855 |
 8 | SVASGGSGNSRRTNPSDNSSDSDAK | 25 | MH16 | 1.853 |
 9 | AVTTSTPGSKGSVTSGGSGGSGGSGGSVA | 29 | MH22 | 1.829 |
 10 | AVTTSTPGSKGSGGSVASGGSGGSGG | 26 | MH11 | 1.812 |
 11 | AVTTSTPGSKGSVTSGGSGGSGGSVASGG SGGSVASGGSGNSRRTNPSDNSSDSDAK | 57 | MH20 | 1.797 |
 12 | AVTTSTPGSKGSVTSGG SGGSGGSGATVPSGTAS | 31 | MH12 | 1.797 |
 13 | AVTTSTPGSKGSVASGGS GNSRRTNPSDNSSDSDAK | 36 | MH18 | 1.794 |
 14 | AVTTSTPGSKGSVTSGGSGGSGGSVA | 26 | MH2 | 1.760 |
 15 | AVTTSTPGSGGSVT | 14 | MH24 | 1.760 |
 16 | AVTTSTPGSKGSVTSGGSGGSVASGGSG GSVASGGSGNSRRTNPSDNSSDSDAK | 54 | MH8 | 1.760 |
 17 | AVTTSTPGSKGSGGSVA | 17 | MH10 | 1.758 |
 18 | AVTTSTPGSKGSVTSGGSGGSGGSVA | 26 | MH1, MH3 | 1.755 |
 19 | AVTTSTPGSGGSVTSGGSGGSVTSGGSGG | 29 | MH13 | 1.746 |
 20 | AVTTSTPGSGGSVTSGGSGG | 20 | MH14, MH15, MH17 | 1.745 |
 21 | AVTTSTPGSKGSVTSGG SGGSGGSVASGGSGG | 32 | MH6 | 1.733 |
 22 | GGTAVTTSTPGSGGSVT | 17 | MH16 | 1.710 |
 23 | AVTTSTPGSKGSVTSGGSGGSVASGGSGGSVASGGSGGSVA | 41 | MH7 | 1.681 |
 24 | AVTTSTPGSKGSVTSGGSGGSVASGGSGG | 29 | MH4, MH5, MH6 | 1.665 |
 25 | SVTSGGSGG | 9 | MH24 | 1.649 |
 26 | VASGGSGGSVASGGSGGSVA | 20 | MH19 | 1.615 |
 27 | VASGGSGGSVA | 11 | MH10 | 1.598 |
 28 | VASGGSGG | 8 | MH1, MH3, MH22 | 1.583 |
 29 | SVASGGSGG | 9 | MH2 | 1.567 |
 30 | AVTTSTPGSVA | 11 | MH19 | 1.499 |
 31 | VASGGSGNSRRTNPSDNSSDSDAK | 24 | MH2 | 1.458 |
Potential B cell epitopes for RO33 | ||||
 1 | QSAKNPPGATVPSGTAS | 17 | Rhap1 | 1.880 |
Rhap2 | 1.869 | |||
Rhap3 | 1.867 | |||
Potential B cell epitope on MSP1-19 | ||||
 1 | TEEDSGSN | 8 | Mhap 1, Mhap 4 | 1.734 |
 2 | TEEDSGS | 7 | Mhap 2, Mhap 3 | 1.676 |
 3 | VENPNPTCNENNGGC | 15 | Mhap 3 | 1.552 |
 4 | CVENPNPTCNENNGGC | 16 | Mhap 2 | 1.539 |
Mhap 1, Mhap 4 | 1.537 | |||