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Table 1 List of primers including name, nucleotide sequence, PCR step, fragment size and specificity of the nested PCR [6, 8, 12]

From: Evidence of asymptomatic submicroscopic malaria in low transmission areas in Belaga district, Kapit division, Sarawak, Malaysia

 

Plasmodium spp.

Size (bp)

Primer name

Primer sequences

PCR (T)

Nested 1st round

Genus-specific

1600–1700

rPLU1

rPLU5

TCAAAGATTAAGCCATGCAAGTGA

CCTGTTGTTGCCTTAAACTTC

56 °C

Nested 2nd round

Genus-specific

235

rPLU3

rPLU4

TTTTTATAAGGATAACTACGGAAAAGCTGT

CCCGTCATAGCCATGTTAGGCCAATACC

59 °C

Nested 2nd round species specific

P. vivax

121

rVIV1

rVIV2

CGCTTCTAGCTTAATCCACATAACTGATAC

ACTTCCAAGCCGAAGCAAAGAAAGTCCTTA

60 °C

P. falciparum

206

rFAL1

rFAL2

TTAAACTGGTTTGGGAAAACCAAATATATT

ACACAATGAACTCAATCATGACTACCCGTC

P. ovale

226

rOVA1

rPLU2

ATCTCTTTTGCTATTTTTTAGTATTGGAGA

ATCTAAGAATTTCACCTCTGACATCTG

P. malariae

145

rMAL1

rMAL2

ATAACATAGTTGTACGTTAAGAATAACCCC

AAAATTCCCATGCATAAAAATTATACAAA

P. knowlesi

153

Pmk8

Pmkr9

GTTAGCGAGAGCCACAAAAAAGCGAAT

ACTCAAAGTAACAAAATCTTCCGTA

61 °C