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Table 2 List of primers including name, nucleotide sequence, final concentration, PCR step, fragment size and specificity of the NM-PCR [13,14,15]

From: Evidence of asymptomatic submicroscopic malaria in low transmission areas in Belaga district, Kapit division, Sarawak, Malaysia

Name

Sequence 5′-3′

Final concentration (μM)

PCR (Ta)

Sizea (bp)

Specificity

PLF

AGTGTGTATCAATCGAGTTTC

0.0375

1° PCR

58 °C

783–821b

Plasmodium

REV

GACGGTATCTGATCGTCTTC

0.0375

1° PCR

58 °C

–

Universal

HUF

GAGCCGCCTGGATACCGC

0.00625

1° PCR

58 °C

231

Human

NewPLFshort

CTATCAGCTTTTGATGTTAG

0.0375

2° PCR

53 °C

–

Plasmodium

Malshort

TCCAATTGCCTTCTG

0.0625

2° PCR

53 °C

215

P. malariae

Falshort

GTTCCCCTAGAATAGTTACA

0.0375

2° PCR

53 °C

344

P. falciparum

Vivshort

AAGGACTTCCAAGCC

0.025

2° PCR

53 °C

457

P. vivax

OvaNew

CCAATTACAAAACCATG

0.0875

2° PCR

53 °C

176

P. ovale

NewPKrev

CGCGGAGGCATC

0.025

2° PCR

53 °C

389

P. knowlesi

  1. aExpected size of the PCR product between the corresponding Universal/Plasmodium primer with the species specific primer
  2. bSize depending upon species