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Table 4 Number and type of samples in agreement or discordance based on results from ddPCR and qPCR assays

From: Droplet digital polymerase chain reaction (ddPCR) for the detection of Plasmodium knowlesi and Plasmodium vivax

Agreement

Pv

Pk

Pv + Pk

Negative

Nested PCR-confirmed Pv only (n = 30)

19

1

Nested PCR-confirmed Pk only (n = 29)

15

1

Other Plasmodium spp. (n = 2)

2

Microscopy–negative (n = 12)

1

9

Discordance

qPCR result – ddPCR result

Pv (qPCR) − Pv + Pk (ddPCR)

Pv + Pk (qPCR) − Pv (ddPCR)

Pv (qPCR) - negative (ddPCR)

Pv + Pk (qPCR) − negative (ddPCR)

Nested PCR-confirmed Pv only (n = 30)

2

5

2

1

 

Pk (qPCR) − Pv + Pk (ddPCR)

Pv (qPCR) − Pv + Pk (ddPCR)

Pv + Pk (qPCR) − Pk (ddPCR)

Pk (qPCR) − negative (ddPCR)

Nested PCR-confirmed Pk only (n = 29)

3

1

6

3

 

Pv (qPCR) − Pk (ddPCR)

Pv (qPCR) − negative (ddPCR)

  

Microscopy-negative (n = 12)

1

1

  
  1. Pv, P. vivax; Pk, P. knowlesi