From: Molecular surveillance and temporal monitoring of malaria parasites in focal Vietnamese provinces
Genus/species | Target | Primer ID | Primer sequence (5′ – 3′) | 5′ modified | 3′ modified | References |
---|---|---|---|---|---|---|
Plasmodium | 18S rRNA gene | rPLU6-F | TTAAAATTGTTGCAGTTAAAACG | Â | Â | [21] |
 |  | rPLU5-R | CCTGTTGTTGCCTTAAACTTC |  |  |  |
P. falciparum | 18S rRNA type S | PF-F | ATTGCTTTTGAGAGGTTTTGTTACTTT | Â | Â | [22] |
 |  | PF-R | GCTGTAGTATTCAAACACAATGAACTCAA |  |  |  |
 |  | PF-Probe | CATAACAGACGGGTAGTCAT | HEX | MGBEQ |  |
P. vivax | 18S rRNA type A | VIV-F | GCAACGCTTCTAGCTTAATCCAC | Â | Â | [23] |
 |  | VIV-R | CAAGCCGAAGCAAAGAAAGTCC |  |  |  |
 |  | VIV-Probe | ACTTTGTGCGCATTTTGCTA | HEX | MGBEQ |  |
P. malariae | 18S rRNA gene | PM-F | GGTGTTGGATGATAGAGTAA | Â | Â | [20] |
 |  | PM-R | CCCAAAGACTTTGATTTCTC |  |  |  |
 |  | PM-Probe | AGGAAGCTATCTAAAAGAAACACTCAT | HEX | BHQ-1 |  |
P. ovale curtisi | 18S rRNA gene | POS-F | ATTTCAAAGAGTCATGGCGTTTCTG | Â | Â | [20] |
 |  | POS-R | TTGTAAAGGAGACACTTTCTTGAAATCG |  |  |  |
 |  | POS-Probe | CTCCTTGGTCGATCTGCCCAGCACT | FAM | BHQ-1 | [20] |
P. ovale wallikeri | 18S rRNA gene | POS-F | ATTTCAAAGAGTCATGGCGTTTCTG | Â | Â | Â |
 |  | POW-R | TGTAAAGGAGACAACTTTCTTGGAGCTA |  |  |  |
 |  | POW-Probe | TTGATCGCCCAGCACTGACCATCT | HEX | BHQ-1 |  |