In silico identification of novel open reading frames in Plasmodium falciparum oocyte and salivary gland sporozoites using proteogenomics framework

Table 2 Correlation of TPM values between antisense transcripts and their associated reference transcripts across the two life cycle stages (oocyst and salivary gland sporozoites)

Associated reference transcript	Antisense transcript	Correlation coefficient	p-value	Reference transcript fold-change	Reference protein fold-change
PF3D7_0209600.1	MSTRG.182.1	0.984	0.000360	↓	ns
PF3D7_0103800.1	MSTRG.17.1	− 0.964	0.00187	↓	↓
PF3D7_0414500.1	MSTRG.618.1	0.947	0.00415	↓	ns
PF3D7_0314000.1	MSTRG.401.1	− 0.928	0.00758	↓	↑
PF3D7_1116000.1	MSTRG.2636.1	0.879	0.0211	↓	↓

↓ indicates that the fold change is negative in differential expression analysis and ↑ indicates positive fold-change. ns indicates that the reference transcript was not significantly differentially expressed

ISSN: 1475-2875