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Table 2 Correlation matrix for inter-correlation of five selected descriptors and their correlation with the bioactivity (pIC50) against P. falciparum 3D7A with the Pearson’s correlation coefficient values

From: 2D-quantitative structure–activity relationships model using PLS method for anti-malarial activities of anti-haemozoin compounds

Descriptor type

Descriptor

a_ICM

GCUT_SLOGP_2

h_pavQ

PEOE_VSA-0

rsynth

Atom count

Atom information content (a_ICM)

1

0.0031

0.0385

0.0683

0.0647

Adjacency and distance Matrix

Using atomic contribution to logP (GCUT_SLOGP_2)

0.0031

1

0.0169

0.0001

0.0088

Average total charge sum

h_pavQ

0.0385

0.0169

1

0.0084

0.0447

Particle charge

PEOE_VSA-0

0.0683

0.0001

0.0084

1

0.0573

Molecular

Estimates the synthesizability of molecules (rsynth)

0.0647

0.0088

0.0447

0.0573

1

 

pIC50

0.1327

0.1204

0.4059

0.0962

0.0733

  1. IC50: half maximal inhibitory concentration