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Table 3 Sequence analysis of P. falciparum surf1.1 extracellular region from Thai isolates

From: Genetic polymorphism of the extracellular region in surface associated interspersed 1.1 gene of Plasmodium falciparum field isolates from Thailand

Analysis

Result

 

Number of Haplotypes (H)

6

 

Haplotype (gene) diversity (Hd)

0.598

± 0.089

Nucleotide diversity (Pi)

0.00381

 

Variance of haplotype diversity

0.00789

 

Average number of pairwise nucleotide differences (k)

3.441

 

Fu and Li’s D* test

− 1.24255

P > 0.10

Fu and Li’s F* test

− 1.10175

P > 0.10

Tajima’s D test

− 0.27968

P > 0.10

Number of segregating sites (S)

15

 

Number of non-synonymous sites (pN)

Tajima’s D (NonSyn)

11

0.49830

P > 0.10

Number of synonymous sites (pS)

Tajima’s D (Syn)

4

− 1.88923

P < 0.05

pN/pS ratio

Tajima’s D (NonSyn/Syn) ratio

2.75

− 0.26376

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