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Table 2 Principal Component Analysis (PCA) loadings, percentage of variance explained, and cumulative proportion of variance explained by the six principal components

From: An urban-to-rural continuum of malaria risk: new analytic approaches characterize patterns in Malawi

Variable

PC1

PC2

PC3

PC4

PC5

PC6

Distance to health facility

− 0.65

− 0.03

− 0.05

− 0.20

− 0.17

− 0.71

Distance to road

− 0.60

− 0.09

0.19

− 0.42

0.08

0.64

Distance to river

− 0.10

− 0.41

0.78

0.44

0.11

− 0.10

Distance to lake

0.04

0.66

0.35

− 0.20

0.61

− 0.18

Population

0.41

− 0.05

0.44

− 0.64

− 0.46

− 0.11

Elevation

− 0.18

0.63

0.20

0.37

− 0.61

0.17

Standard deviation

1.30

1.11

1.00

0.92

0.89

0.68

Proportion of variance

28.00%

20.50%

16.50%

14.10%

13.30%

7.70%

Cumulative proportion

28.00%

48.50%

65.00%

79.00%

92.30%

100.00%

  1. The first two principal components are used in subsequent analyses as the urbanicity metric