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Table 5 SNPs detected in the pfk13 gene by sequencing

From: Temporal evolution of the resistance genotypes of Plasmodium falciparum in isolates from Equatorial Guinea during 20 years (1999 to 2019)

Year

(N)

Sample ID

No codon

Wild allele

Mutant allele

Mutation

Type

Freq

Sequence (nt)

AA

Sequence (nt)

AA

2001

N = 102

136-H

612

gaA

Glu

gaG

Glu

E612E

S

0.98%

2004–5

N = 262

HQ-019

569

gCa

Ala

gTa

Val

A569V

NS

0.76%

HFA-106

645

aaC

Asn

aaT

Asn

N645N

S

2006

N = 158

101_9_3

663

Cta

Leu

Tta

Leu

L663L

S

0.6%

2013

N = 170

210.01.02

469

tgC

Cys

tgT

Cys

C469C

S

1.76%

110.01.01

510

gTg

Val

gCg

Ala

V510A

NS

203.01.02

578

Gct

Ala

Tct

Ser

A578S

NS

2019

N = 139

2974

532

tGt

Cys

tAt

Tyr

C532Y

NS

5.03%

638

Gga

Gly

Aga

Arg

G638R

NS

3235

469

tgC

Cys

tgT

Cys

C469C

S

3502

544

Ggg

Gly

Agg

Arg

G544R

NS

3756

469

tgC

Cys

tgT

Cys

C469C

S

3812

668

Gag

Glu

Aag

Lys

E668L

NS

3819

464

Gat

Asp

Aat

Asn

D3819N

NS

  1. SNPs detected in the pfk13 gene after sequencing and their study. The type of mutation detected, synonymous or non-synonymous is indicated
  2. ID: identification; AA: amino acid, nt: nucleotide; Freq.: frequency. A capital letter in the codon sequence indicates the muted nucleotide; S: Synonymous; NS: Non-Synonymous. The nucleotide that changes with the mutation is shown in capital letters and in bold