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Fig. 3 | Malaria Journal

Fig. 3

From: Gene Coverage Count and Classification (GC3): a locus sequence coverage assessment tool using short-read whole genome sequencing data, and its application to identify and classify histidine-rich protein 2 and 3 deletions in Plasmodium falciparum

Fig. 3

Subtelomeric read coverage distribution plots. Log10 of subtelomeric read coverage for reference strains NF54 (hrp2 and hrp3 present), Dd2 (hrp2 absent) and HB3 (hrp3 absent). Coverage was measured using a 1000 bp sliding window (i.e. interval) with a 500 bp “step” between windows. A. Chromosome 08 subtelomeric region coverage (black lines denotes hrp2 coding positions 1,374,236–1,375,299). B. Chromosome 13 subtelomeric region coverage (black lines denotes hrp3 coding positions 2,840,727–2,841,703)

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Malaria Journal

ISSN: 1475-2875

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