From: Genome-wide association testing in malaria studies in the presence of overdominance
SNPs | \(P-values\) using different Methods | ||||||
---|---|---|---|---|---|---|---|
Statistic | MAXboot | MAXbvn | MAXasym | Alle-statistic | AllelicP-value | Model | |
rs380390 | 5.11 | 1.0E−06 | 2.0E−06 | 8.6E−07 | 30.14 | 4.0E−08 | Additive |
rs1329428 | 4.92 | 7.5E−04 | 4.0E−06 | 2.2E−06 | 23.34 | 1.4E−06 | Recessive |
rs1447295 | 4.08 | 9.5E−05 | 1.0E−04 | 1.1E−04 | 16.64 | 4.5E−05 | Additive |
rs698267 | 4.46 | 1.7E−05 | 2.1E−05 | 2.2E−05 | 19.70 | 9.0E−06 | Additive |
rs7837688 | 4.69 | 5.0E−06 | 7.0E−06 | 6.7E−06 | 22.36 | 2.3E−06 | Additive |
rs10510126 | 4.99 | 2.2E-16 | 2.0E−06 | 1.4E−06 | 22.95 | 1.7E−06 | Recessive |
rs12505080 | 4.15 | 8.2E−05 | 8.9E−05 | 8.5E−05 | 0.96 | 3.3E−01 | Dominant |
rs17157903 | 4.72 | 2.0E−06 | 9.0E−06 | 5.8E−06 | 11.68 | 6.3E−04 | Heterosis |
rs1219648 | 4.77 | 6.0E−06 | 1.0E−05 | 5.0E−06 | 23.45 | 1.3E−06 | Additive |
rs7696175 | 4.48 | 2.0E−05 | 3.3E−05 | 2.0E−05 | 0.30 | 5.8E−01 | Heterosis |
rs2420946 | 4.75 | 6.0E−06 | 8.0E−06 | 5.3E−06 | 23.20 | 1.5E−06 | Additive |
rs2820037 | 5.28 | 2.2E-16 | 2.2E-16 | 3.2E−07 | 16.12 | 5.9E−05 | Heterosis |
rs6997709 | 4.46 | 2.2E−05 | 3.3E−05 | 2.1E−05 | 20.00 | 7.7E−06 | Additive |
rs7961152 | 19.96 | 7.9E−06 | 1.8E−05 | 2.0E−05 | 16.12 | 5.9E−05 | Additive |
rs11110912 | 4.65 | 8.0E−06 | 1.1E−05 | 8.1E−06 | 19.48 | 1.0E−05 | Recessive |
rs1937506 | 4.43 | 2.4E−05 | 2.4E−05 | 2.4E−05 | 19.55 | 9.8E−06 | Additive |
rs2398162 | 4.91 | 1.0E−06 | 3.0E−06 | 2.4E−06 | 20.41 | 6.2E−06 | Recessive |