Table 1 Metrics of data sets containing variant and invariant sites
From: Genomic signatures of population decline in the malaria mosquito Anopheles gambiae
Species | No. indivs. | No. of tag locations | No. bp | Mean coverage | Mean dist between RADseq tags (kb) | No. of SNPsa | Mean (Max) SNPs per tag |
|---|---|---|---|---|---|---|---|
An. gambiae | 24 | 2033 | 172,655 | 88 | 131 | 6387 (6437) | 3.14 (17) |
An. arabiensis | 36 | 2049 | 129,315 | 106 | 130 | 5137 (5195) | 2.51 (23) |
An. merus | 12 | 2280 | 253,043 | 134 | 115 | 4135 (4161) | 1.81 (13) |