Primer | Primer sequences | Attending band | |
---|---|---|---|
Primers | Plas_F | 5ʹ-GCTTAGTTACGATTAATAGGAGTAGCTTG-3ʹ | |
Plas_R | GAAAATCTAAGAATTTCACCTCTGACA-3ʹ | ||
Probe | Falci + | 5ʹ- TCTGAATACGAATGTC-3ʹ | FAM |
OVM + | 5ʹ- CTGAATACAAATGCC-3ʹ | HEX | |
First round PCR | rPLU6 | 5ʹ-TTA AAA TTG TTG CAG TTA AAA CG-3ʹ | |
rPLU5 | 5ʹ-CCT GTT GTT GCC TTA AAC TTC-3ʹ | ||
Second round PCR | rFAL1 | 5ʹ-TTA AAC TGG TTT GGG AAA ACC AAA TAT ATT-3ʹ | 205 bp |
rFAL2 | 5ʹ-ACA CAA TGA ACT CAA TCA TGA CTA CCC GTC-3ʹ | ||
rMAL1 | 5ʹ-ATA ACA TAG TTG TAC GTT AAG AAT AAC CGC-3ʹ | 105 bp | |
rMAL2 | 5ʹ-AAA ATT CCC ATG CAT AAA AAA TTA TAC AAA-3ʹ | ||
rOVA1 | 5ʹ-ATC TCT TTT GCT ATT TTT TAG TAT TGG AGA-3ʹ | 800 bp | |
rOVA2 | 5ʹ-GGA AAA GGA CAC ATT AAT TGT ATC CTA GTG-3ʹ | ||
rVAV1 | 5ʹ-GCT TCG GCT TGG AAG TCC-3ʹ | 120 bp | |
rVAV2 | 5ʹ-CCG AAT TCA GTC CCA CGT-3ʹ | ||
SINE_200 | Sine_F | TCG CCT TAG ACC TTG CGT TA | Ag ss = 249 bp Ac = 479, Aa = 223 |
Sine_R | CGC TTC AAG AAT TCG AGA TAC | ||
COCTAIL An. funestus group multiplex PCR | ITS2A | 5ʹ TGT GAA CTG CAG GAC ACA T 3ʹ | |
ITS2B | 5ʹ TAT GCT TAA ATT CAG GGG GT 3ʹ | ||
UV | 5ʹ TGT GAA CTG CAG GAC ACA T 3ʹ | ||
FUN | 5ʹ GCA TCG ATG GGT TAA TCA TG 3ʹ | 506 | |
VAN | 5ʹ TGT CGA CTT GGT AGC CGA AC 3ʹ | 578 | |
RIV | 5ʹ CAA GCC GTT CGA CCC TGA TT 3ʹ | 411 | |
PAR | 5ʹ TGC GGT CCC AAG CTA GGT TC 3ʹ | 252 | |
LEES | 5ʹ TAC ACG GGC GCC ATG TAG TT 3ʹ | 146 |