Table 1 Sequence polymorphism and distribution of the 10 Pfnhe- 1 ms4760 haplotypes observed in the 79 Vietnamese parasite isolates
No. Genotype profile | Sequence | N (freq.) | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
DNNND repeat | NHNDNHNNDDD repeat | |||||||||
ms-1: | KKKKISGSNNDNN | DNNND | DNNND | NHNDDKNNKNDDD | NHNDNHNNDDD | NHNDNHNNDDD | NNNDNHNDDDNNSSHY | 6(7.6) | ||
ms-3: | KKKKISGSNNDNN | DNNND | DKNNKNDDD | NHNDNHNNDDD | NHNDNHNNDDD | NNNDNHNDDDNNSSHY | 5(6.3) | |||
ms-5: | KKKKISGSNNDNN | DNNND | DNNND | DNNND | DNNND | NHNDDKNNKNDDD | NHNDNHNNDDD | NNDNHNDDDNNSSHY | 1(1.3) | |
ms-6: | KKKKISGSNNDNN | DNNND | DNNND | NHNDDKNNKNDDD | NHNDNHNNDDD | NNNDNHNDDDNNSSHY | 6(7.6) | |||
ms-7: | KKKKISGSNNDNN | DNNND | DNNND | DNNND | NHNDDKNNKNDDD | NHNDNHNNDDD | NNNDNHNDDDNNSSHY | 54(68.3) | ||
ms-18: | KKKKK SGSNNDNN | DNNND | DNNND | NHNDDKNNKNDDD | NHNDNHNNDDD | NHNDNHNNDDD | NNNDNHNDDDNNSSHY | 2(2.5) | ||
ms-49: | KKKKISGSNNDNN | DNNND | DNNND | DNNND | NHNDDKNNN NDDD | NHNDNHNNDDD | NNNDNHNDDDNNSSHY | 1(1.3) | ||
ms-63: | KKKKISGSNNDS N | DNNND | DNNND | DNNND | DNNND | NHNDDKNNKNDDD | NHNDNHNNDDD | NNNDNHNDDDNNSSHY | 1(1.3) | |
ms-64: | KKKKISGSNNDNN | DNNND | DNNND | NNNN | D | NHNDDKNNKNDDD | NHNDNHNNDDD | NNNDNHNDDDNNSSHY | 2(2.5) | |
ms-65: | KKKKISGSNNDNN | D | NHNDDKNNKNDDD | NHNDNHNNDDD | NHNDNHNNDDD | NNNDNHNDDDNNSSHY | 1(1.3) | |||