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Table 2 Primer sequences and conditions for the PCR of the MIF gene

From: Variations in ncRNA gene LOC284889 and MIF-794CATT repeats are associated with malaria susceptibility in Indian populations

PCR set

Primer locations

Primer sequences (5′ - 3′)

Annealing temperature (°C)

PCR product size

SET 1

MIF-F (−1202)

GAGCAGTGGACACTCAGTCAGC

65

600 bp

MIF-R (−647)

CCTCTGGGCAACTTCAGCTCCT

SET 2

MIF-F (−740)

GCACCTGCTAGATGGTCCCCG

65

696 bp

MIF-R (−86)

AGTGGGGAAGTCACCGCCTG

SET 3

MIF-F (−315)

TTCATCTCTGGAAGGGTAAGGGG

62

1370 bp

MIF-R(+1009)

GACACTGGGGCTCCTCTGTTAGG

MIF-Internal

AGTGGTGTCCGAGAAGTCAG

SET 4

MIF-F (+747)

TAAGAGCCGCAGGGACCCAC

67

596 bp

MIF-R (+1302)

TGGCAGTGAGTGGCTCTGGG

SET 5

MIF-F (+1182)

GGGAGGAGGAGTTGGAGTTGGG

65

600 bp

 

MIF-R (+1757)

CCCTGGAGCTTCTATTCTCCTTCCT

  
  1. Primer locations are relative to transcription start site.