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Table 2 Assay methodologies used by study participants

From: Establishment of the 1st World Health Organization International Standard for Plasmodium falciparum DNA for nucleic acid amplification technique (NAT)-based assays

Lab No.

Nucleic Acid Extraction

Nucleic Acid Amplification

Sequence Targeted

1A

QIAamp DNA Mini Blood Kit

Qiagen Taq DNA polymerase

Small subunit rRNAa

1B

QIAamp DNA Mini Blood Kit

TaqMan® universal Master MIX

Conserved ATS domain of var genes

2A

QIAamp DNA Blood kit

Eppendorf Master Mix 2.5 × kit, gel based assay

18S rRNAb

2B

QIAamp DNA Blood kit

QuantiTectProbe PCR Kit, real-time PCR

18S rRNAb

3A

MagNA Pure LC Total Nucleic Acid Isolation Kit

LightCycler Fast Start DNA Master SYBRGreen I

18S rRNA

3B

MagNA Pure LC Total Nucleic Acid Isolation Kit

RealArt™ Malaria LC PCR Kit

18S rRNA

4

QIAamp DNA Blood Mini Kit

MBI Taq DNA polymerase

Small subunit rRNA genea

5

Boom et al., 1990 [20]

RNA T7 Polymerase, AMV-RT, RNAse H, bioMerieux

18S rRNAc

6

MagNA Pure LC DNA Isolation Kit I

LightCycler FastStart DNA MasterPLUS Hybprobe

18S rRNA

7

QIAamp DNA Mini Kit

Taqman 2 × Universal PCR Mastermix

β-tubulind

8

QIAamp DNA Mini Kit

TaqMan® Universal Master Mix

18S rRNAb

9

QIAamp DNA Mini Blood Kit

N/A

18S rRNA

10A

QIAamp DNA Mini Blood Kit

Bioline Taq Polymerase

18S rRNAa

10B

QIAamp DNA Mini Blood Kit

Fast Start DNA Sybr Green Kit

18S rRNA

11A

Roche High Pure PCR Template Preparation Kit

Applera Taq Polymerase, Applied Biosystems

18S rRNAe

11B

Roche High Pure PCR Template Preparation Kit

2 × Taqman Universal

18S rRNAa

12

QIAamp DNA Mini Blood Kit

AmpliTaq Gold DNA Polymerase

18S rRNAa

13

QIAamp DNA Blood/Mini Kit

artus Malaria PCR Kit

18S rRNA

14

High Pure PCR Template Preparation Kit

Applied Biosystems Taq Polymerase

18S rRNAe

  1. Assays performed according to the following published methods a[18, 19], b [extraction method only, [20]], c[21], d[22], e[23], For other assays there were either no previously published methods or the information was not disclosed