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Table 1 Laboratories performing PCR genotyping with assessment of PCR use-effectiveness in 17 in vivo studies of antimalarial drug efficacy

From: Different methodological approaches to the assessment of in vivo efficacy of three artemisinin-based combination antimalarial treatments for the treatment of uncomplicated falciparum malaria in African children

Year

Country

& Site

Laboratory

Method used

N

Unresolved

by PCR

n

Resolved

by PCR

n

PCR Use-

effectiveness

[95%CI]

    

recurr.

after

day14

   

2002

Zambia, Maheba

Rouen France

msp2

43

3

40

93.0

       

[80.9–98.5]

2003

Angola, Kuito

IMT Antwerp

msp1+msp2

8

0

8

100.0

       

[63.1–100.0]

2003

DRC, Boende

IMT Antwerp

msp1+msp2 +glurp

78

10

68

87.2

       

[77.7–93.7]

2003

S Sudan, Nuba

Wellcome Trust/Medical College of Malawi

msp1+msp2

54

15

39

72.2

       

[58.3–83.5]

2003

Uganda, Amudat

Epicentre Mbarara

msp1+msp2 +glurp

73

4

69

94.5

       

[86.6–98.5]

2003

Uganda, Jinja

UCSF

msp2

27

2

25

92.6

       

[75.7–99.1]

2003

Uganda, Kampala

UCSF

msp2

14

0

14

100.0

       

[76.8–100.0]*

2004

Angola, Caala

Mbarara University

msp1+msp2 +glurp

6

2

4

66.7

       

[22.3–95.7]

2004

Congo, Kindamba

SMRU

msp1+msp2 +glurp

60

24

36

60.0

       

[46.5–72.4]

2004

DRC, Kabalo

Epicentre Mbarara

msp1+msp2 +glurp

10

1

9

90.0

       

[55.5–99.7]

2004

Guinea, Dabola

Epicentre Mbarara

msp1+msp2 +glurp

14

1

13

92.9

       

[66.1–99.8]

2004

Sierra Leone, Kailahun

Paris, Avicenne

msp1+msp2

65

1

64

98.5

       

[91.7–100.0]

2004

Uganda, Apac

UCSF

msp2

76

3

73

96.0

       

[88.9–99.2]

2004

Uganda, Arua

UCSF

msp2

61

4

57

93.4

       

[84.1–98.2]

2004

Uganda, Tororo

UCSF

msp2

120

3

117

97.5

       

[92.9–99.5]

2005

Burkina Faso, Bobo-Dioulasso

UCSF

msp1 +msp2 + 4 microsatellites

24

0

24

100

       

[85.7–100]*

2005

Uganda, Tororo

UCSF

msp1+msp2

209

4

205

98.1

       

[95.2–99.5]

 

TOTAL

  

942

77

865

 
 

Weighted average [CI 95]

     

91.8 [89.9–93.4]

 

Median [range]

     

93.4 [60–100]

  1. Use-effectiveness = number of children with parasite recurrence resolved by PCR/total number of children with recurrences after day 14.
  2. * One sided 97.5% CIs have been calculated
  3. IMT Institut de Médecine Tropicale Antwerp
  4. KEMRI Kenya Medical Research Institute
  5. SMRU Shoklo Malaria Research Unit, Thailand
  6. UCSF University of California, San Francisco
  7. msp1 merozoite surface protein 1
  8. msp2 merozoite surface protein 2
  9. glurp glutamate rich protein