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Table 3 Expected and observed heterozygosity values for SNPs deviating from Hardy-Weinberg Expectations in the study populations.

From: Candidate malaria susceptibility/protective SNPs in hospital and population-based studies: the effect of sub-structuring

Area

Name

ObsHET

PredHET

HWpval

Sinnar (N = 58)

rs1803632

0.388

0.499

0.0386

 

rs17047661

0.213

0.296

0.0207

 

rs2706384

0.34

0.456

0.0231

 

rs1800750

0.932

0.498

2.12E-15

 

rs229587

0.618

0.498

0.0428

 

rs10775349

0.39

0.496

0.0462

 

rs3092945

0.333

0.486

0.0124

 

rs1126535

0.141

0.235

0.0023

Massalit (N = 87)

rs3092945

0.377

0.5

0.0452

 

rs8176747

0.188

0.285

0.0262

 

rs8176746

0.19

0.288

0.0282

Hausa (N = 66)

rs3092945

0.266

0.446

0.0026

  1. The number of tested individuals (N).