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Table 3 Comparison of genetic divergence between apical membrane antigen-1 (AMA1) sequences P. falciparum infections occurring in children immunized with a bivalent AMA1 malaria vaccine or control vaccine, before and after immunization, and in comparison with the vaccine strains 3D7 and FVO

From: Lack of allele-specific efficacy of a bivalent AMA1 malaria vaccine

 

Average number of nucleotide differences

(k)

Average number of nucleotide substitutions per site

(Dxy)

Number of net nucleotide substitution between population

(Da)

Comparison at baseline

   

   Malaria vaccine vs. control group

20.805

0.0172

0.0003

Pre- vs. post-immunization

   

   Control group

20.694

0.0173

0.0004

   Malaria vaccine group

20.773

0.0173

-0.0001

Comparison after immunization

   

   Malaria vaccine vs. control group

20.739

0.0172

-0.00002

Comparisons with vaccine strains

   

   At baseline

   

Controls vs. 3D7

19.971

0.0193

0.0111

Control group vs. FVO

19.775

0.0173

0.0091

Malaria vaccine group vs. 3D7

21.108

0.0166

0.0078

Malaria vaccine group vs. FVO

21.394

0.0193

0.0104

   Post-immunization

   

Controls vs. 3D7

20.743

0.0179

0.0111

Control vs. FVO

20.768

0.0193

0.0107

Malaria vaccine group vs. 3D7

20.780

0.0176

0.009

Malaria vaccine group vs. FVO

20.807

0.0192

0.0106