Skip to main content

Advertisement

Table 4 Lack of association between LTA/TNF/LTB SNPs and severe malaria subgroups when compared with adult and childhood controls in the Papuan population.

From: A study of the TNF/LTA/LTB locus and susceptibility to severe malaria in highland papuan children and adults

dbSNP rs All CM (106)a Adult SM (262) Adult CM (85) Childhood SM(118) Childhood CM(21)
  MAFb P-value MAF P-value MAF P-value MAF P-value MAF P-value
rs2857602 0.28 1.000 0.27 1.000 0.27 1.000 0.28 0.999 0.26 1.000
rs3131637 0.28 1.000 0.27 1.000 0.27 1.000 0.28 0.999 0.26 1.000
rs2844484 0.28 1.000 0.27 1.000 0.27 1.000 0.28 0.999 0.26 1.000
rs2844483 0.28 1.000 0.27 1.000 0.27 1.000 0.28 0.999 0.26 1.000
rs2009658 0.25 1.000 0.26 1.000 0.26 1.000 0.26 0.951 0.22 0.999
rs2844482 0.27 1.000 0.26 1.000 0.26 1.000 0.26 0.957 0.22 0.999
rs2071590 0.51 0.841 0.46 0.895 0.45 0.963 0.47 0.631 0.44 0.950
rs1800683 0.01 1.000 0.01 1.000 0.01 1.000 0.02 0.488 0.04 1.000
rs2239704 0.28 1.000 0.27 1.000 0.27 1.000 0.28 0.999 0.26 1.000
rs909253 0.01 1.000 0.01 1.000 0.01 1.000 0.02 0.488 0.04 1.000
rs2857713 0.27 1.000 0.26 1.000 0.26 1.000 0.26 0.983 0.23 1.000
rs1041981 0.01 1.000 0.01 0.999 0.01 1.000 0.02 0.488 0.04 1.000
rs1799964 0.27 1.000 0.26 1.000 0.26 1.000 0.26 0.951 0.22 0.999
rs1799724 0.36 0.597 0.41 0.992 0.41 0.869 0.41 0.744 0.45 0.992
rs1800610 0.36 0.902 0.40 1.000 0.40 0.945 0.41 0.828 0.44 0.996
rs3091257 - - - - - - - - - -
rs769178 0.36 0.581 0.41 0.992 0.41 0.851 0.41 0.83 0.44 0.996
rs769177 0.06 0.983 0.04 1.000 0.04 1.000 0.05 1.00 0.06 0.995
rs1052248 0.50 0.490 0.45 0.543 0.44 0.878 0.46 0.26 0.40 0.884
  1. aNumber in each group.
  2. bMAF - minor allele frequency in cases.