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Table 1 Statistics of sequence reads mapped to chromosomes

From: UTR introns, antisense RNA and differentially spliced transcripts between Plasmodium yoelii subspecies

Sample name

No. reads (NSM_1)

% reads (NSM_1)

No. reads (NSM_2)

% reads (NSM_2)

Total reads

2,808,0144

 

2,825,3076

 

Total mapped

1,863,0250

66.3

1,862,9614

65.9

Multiple mapped

28,1316

1.0

26,3365

0.9

Uniquely mapped

1,809,6655

64.4

1,812,8822

64.2

Read-1

890,8816

31.7

891,7725

31.6

Read-2

918,7839

32.7

921,1097

32.6

Reads map to ‘ + ’

904,9370

32.2

906,2606

32.1

Reads map to ‘-’

904,7285

32.2

906,6216

32.1

Non-splice reads

1,611,0463

57.4

1,604,6313

56.8

Splice reads

198,6192

7.1

208,2509

7.4

  1. Multiple mapped, number of reads mapped to multiple sites; uniquely mapped, number of reads mapped to one site only; Read-1 and Read-2, reads from the two separate lanes; Reads mapped to ‘+’ or ‘−’, mapped to ‘+’ or ‘−’ strands of DNA; Splice reads, number of reads mapped to splice sites