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Table 1 Differences in allele frequencies between Malawi and other populations (based on pairwise FST scores)

From: Characterizing the impact of sustained sulfadoxine/pyrimethamine use upon the Plasmodium falciparum population in Malawi

Gene ID Position Gene Other East Africa DRC West Africa South Asia Southeast Asia South America
PF3D7_0810800 549,993 dhps 0.053 0.873 0.974 0.118 0.415 0.628
PF3D7_0209000 375,427 P230 0.023 0.035 0.689 0.722 0.569 0.775
PF3D7_1016500 663,199 PHISTc 0.023 0.077 0.504 0.463 0.174 0.775
PF3D7_0913900 596,674 Arginine-tRNA ligase 0.017 0.014 0.769 0.665 0.719 0.518
PF3D7_1339700 1,595,988 Conserved unknown 0.013 0.017 0.323 0.555 0.731 0.213
PF3D7_1032100 1,293,621 dcp1 0.021 0.132 0.709 0.578 0.659 0.485
PF3D7_1223500 958,593 Conserved unknown (near gch1) 0.093 0.285 0.535 0.668 0.667 0.668
PF3D7_1361800 2,481,275 Conserved unknown 0.02 0.019 0.533 0.630 0.606 0.665
PF3D7_0708500 385,921 hsp86 0.292 0.297 0.428 0.542 0.625 0.016
PF3D7_1346800 1,880,114 P47 0.055 0.26 0.434 0.590 0.590 0.590
PF3D7_0113000 489,337 garp 0.024 0.064 0.562 0.587 0.478 0.104
PF3D7_0716700 730,051 Conserved unknown 0.034 0.079 0.366 0.533 0.567 0.567
PF3D7_0307900 350,293 Conserved unknown 0.016 0.169 0.524 0.267 0.487 0.524
PF3D7_1248700 1,997,660 Conserved unknown 0.131 0.211 0.457 0.426 0.457 0.459
PF3D7_1223400 942,564 Phospholipid-transporting ATPase (near gch1) 0.172 0.237 0.380 0.444 0.444 0.444
PF3D7_1223300 938,341 gyrA (near gch1) 0.146 0.237 0.374 0.444 0.308 0.444
PF3D7_1223400 941,821 Phospholipid-transporting ATPase (near gch1) 0.171 0.216 0.381 0.442 0.442 0.442
PF3D7_1426700 1,036,865 pepc 0.022 0.001 0.429 0.251 0.419 0.430
PF3D7_0215300 629,060 acs8 0.174 0.104 0.402 0.393 0.426 0.132
PF3D7_1346700 1,876,606 P48/45 0.120 0.042 0.324 0.426 0.402 0.220
PF3D7_0615900 665,589 Conserved unknown 0.002 0.261 0.37 0.311 0.343 0.373
PF3D7_1433900 1,362,042 Putative protein kinase 0.051 0.012 0.233 0.368 0.340 0.368
PF3D7_0811600 586,054 Conserved unknown 0.003 0.065 0.340 0.358 0.304 0.358
PF3D7_0724900 1,056,801 Putative kinesin-19 0.010 0.099 0.220 0.358 0.344 0.358
PF3D7_1414200 564,437 Conserved unknown 0.003 0.083 0.278 0.333 0.333 0.333
PF3D7_1021700 883,159 Conserved unknown 0.027 0.201 0.317 0.300 0.331 0.331
PF3D7_0627800 1,115,191 Putative acetyl-CoA synthetase 0.042 0.325 0.325 0.325 0.325 0.325
PF3D7_1218300 718,254 Ap2mu 0.029 0.312 0.309 0.312 0.312 0.312
PF3D7_1223100 928,407 PKAr 0.231 0.306 0.306 0.306 0.306 0.306
PF3D7_1222600 911,963 AP2-G 0.218 0.274 0.304 0.304 0.297 0.304
PF3D7_1223300 935,411 gyrA (near gch1) 0.213 0.306 0.306 0.306 0.306 0.306
PF3D7_0932800 1,306,240 Conserved unknown 0.063 0.274 0.304 0.304 0.297 0.304
  1. Values are the median FST values for each regional population. In italics are regional medians above 0.5