Table 4 Comparison of the truncated barcodes to both the full 24 SNP assay and to msp genotyping
| Â | 6 SNP Barcode | 8 SNP Barcode | 10 SNP Barcode | 12 SNP Barcode | 24 SNP Barcode | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNP | 3 | 7 | 11 | 15 | 19 | 22 | 4 | 14 | 9 | 10 | 5 | 17 | Remaining |
Accuracy in identifying reinfection using 24 SNP barcode as the gold standard | 95.1 | 95.1 | 96.7 | 96.7 | 100% | ||||||||
Accuracy in identifying reinfection using msp genotyping as the gold standard | 91.8% | 91.8% | 93.9% | 93.9% | 93.9% | ||||||||