Family specific allele | Nr of different genotypes | Actual fragment size range (bp) | Degree of identity between alleles of study isolates (%) | Reported identical sequences/accession | Degree of identity (%) | Origin | References |
---|---|---|---|---|---|---|---|
K1 | 9 | 153–335 | 90–99 | AF509714 | 90–94 | Brazil | Ferreira et al. [35] |
 |  |  |  | AF191061 | 93–98 | Indonesia | Unpublished |
 |  |  |  | AF061134 | 93–99 | Tanzania | Jiang et al. [68] |
 |  |  |  | AF509651 | 93–99 | Vietnam | Ferreira et al. [35] |
 |  |  |  | M77730 | 93–99 | Thailand | Jongwutiwes et al. [69] |
 |  |  |  | JX416338 | 99 | Brazil | Unpublished |
MAD20 | 5 | 175–205 | 83–92 | AY714585 | 92 | Brazil | Scopel et al. [70] |
 |  |  |  | AF251345 | 83–93 | China | Unpublished |
 |  |  |  | AY138509 | 82 | Iran | Unpublished |
 |  |  |  | AF034635 | 83 | Sudan | Cavanagh et al. [37] |
 |  |  |  | AF509653 | 91 | Vietnam | Ferreira et al. [35] |
 |  |  |  | M77722 | 83 | Thailand | Jongwutiwes et al. [69] |
 |  |  |  | EU32224 | 100 | Central Sub Saharan Africa | Noranate et al. [32] |
R033 | 1 | 155 | 99–100 | AY538507 | 99 | Iran | Unpublished |
 |  |  |  | AF462453 | 99 | Kenya | Takala et al. [33] |
 |  |  |  | AF191064 | 98 | Indonesia | Unpublished |
 |  |  |  | M77737 | 99 | Thailand | Jongwutiwes et al. [69] |
 |  |  |  | AY138508 | 98 | Iran | Unpublished |
IC | 15 | 200–568 | 97 | HM568631 | 97 | India | Unpublished |
FC27 | 12 | 140–387 | 97 | DQ115973 | 97 | Brazil | Peyerl-Hoffmann et al. [46] |
 |  |  |  | DQ338451 | 98 | Iran | Unpublished |
 |  |  |  | AF329577 | 97 | Ghana | Unpublished |
 |  |  |  | AF329579 | 96 | PNG | Unpublished |
 |  |  |  | U91668 | 97 | Gambia | Unpublished |
 |  |  |  | AY532386 | 98 | Tanzania | Unpublished |
 |  |  |  | AF104696 | 99 | Vietnam | Weisman et al. [71] |
 |  |  |  | AY372506 | 100 | Gabon | Mayengue et al. [72] |