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Table 2 Integral gene drive system parameters

From: Population replacement gene drive characteristics for malaria elimination in a range of seasonal transmission settings: a modelling study

Parameter

Description

Default value

Range

d1

Drive efficiency and transmission rate (applies to both driver and effector target loci)

1

0.9–1

p_nhej

Probability of NHEJ if drive transmission fails

0.5

p_ihdr

Probability of incomplete HDR during homing

1E−4

p_r_nhej

Probability of resistance arising from NHEJ

1/3

p_r_ihdr

Probability of resistance arising from incomplete HDR

1/3

1—p_r_nhej

Probability of loss of gene function from NHEJ

2/3

1—p_r_ihdr

Probability of loss gene function from incomplete HDR

2/3

sd1

Fitness cost of hijacking driver target locus

0

sd2

Fitness cost of hijacking effector target locus

0

sn

Fitness cost of driver expression

0.05

se2

Fitness cost of effector expression

0

0–0.5

sm

Fitness cost of loss of gene function

1

hd1

Dominance coefficient for hijacking at driver target locus

0.5

hd2

Dominance coefficient for hijacking at effector target locus

0.5

hn

Dominance coefficient for driver expression

0.5

he2

Dominance coefficient for effector expression

0.5

hm

Dominance coefficient for loss of gene function

0.2

hrc1

Dominance coefficient for parasite refractoriness

1

rc

Homozygous degree of parasite refractoriness

1

0.5–1

rr10

Initial population driver target site resistance frequency

0

rr20

Initial population effector target site resistance frequency

0

0–0.1

  1. All genetic parameters used in integral gene drive mosquito release simulations. Default values are representative of and consistent with other published works [31, 37, 54]. Default values for tested parameters (d1, se2, rc, rr20) are used on accompanying website visualizations