- The ID of reference GPI-APs are in bold. GPI-AP- orthologs predicted by FT-GPI are provided (NA: no available orthologs). Genes presenting discrepancy between synteny and OrthoMCL annotation are italicized (different OrthoMCL ID at a conserved locus between P. falciparum and P. vivax). Proteins which were negative according to FT-GPI detection by selected parameter sets (Additional file 2: Table S2) are in grey. Some proteins had no gene names and were arbitrarily labelled from gpi1 to gpi4. Pf_gpi1 was specific to the list given by Gilson, et al. [17]. The gpi3 protein was labelled as P32 in some references. *Genes encoding MOLO1-domain containing proteins from P. falciparum and P. vivax reference sets were paralogs and were named MOLO1 in the present study
