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Table 2 Relevant ENCODE and GeneHancer regulatory elements within ATP2B4 gene

From: ATP2B4 regulatory genetic variants are associated with mild malaria

Type

Identifier

Coordinatea

Studied SNPs within the regulatory elements

Main promoter

EH38E1413765b

203626509–203626856

None

Proximal enhancer

EH38E1413842b

203681720–203682066

rs10751450, rs10751451, rs10751452

Alternative promoter

EH38E1413843b

203682665–203683013

rs11240734, rs1541252, rs1541253, rs1541254, rs1541255

Enhancer

GH01J203680c

203680647–203684029

rs10751450, rs10751451, rs10751452, rs11240734, rs1541252, rs1541253, rs1541254, rs1541255

  1. aData represent the position on chromosome 1 according to human hg38 coordinates
  2. bEncode identifier
  3. cGeneHancer identifier